Basic Information
Locus ID:
Ah032856
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1311_HRSCAF_2062 | 23318037 | 23322934 | + | Ah032856 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 69,501.42 Da | 37.68 | 87.65 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 212 | 478 | 8.3E-90 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 25 | 127 | 1.7E-8 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 18 | 115 | 2.59E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 8 | 160 | 6.3E-12 | IPR011333 |
| SMART | SM00225 | BTB_4 | 28 | 122 | 6.4E-5 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 98 | 11.853831 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 212 | 502 | 89.888351 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 598 | 622 | - | - |
| Coils | Coil | Coil | 538 | 565 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_021770684.1 | BTB/POZ domain-containing protein At5g03250-like [Chenopodium quinoa] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LSD0 | BTB/POZ domain-containing protein At5g03250-like OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology