Basic Information
Locus ID:
Ah031584
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
chromatin organization
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 97116917 | 97129599 | - | Ah031584 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 108,301.40 Da | 50.64 | 69.49 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04369 | Bromodomain | 35 | 124 | 1.85867E-31 | - |
| Pfam | PF00439 | Bromodomain | 35 | 114 | 1.3E-22 | IPR001487 |
| SUPERFAMILY | SSF47370 | Bromodomain | 26 | 125 | 4.19E-31 | IPR036427 |
| Gene3D | G3DSA:1.20.920.10 | - | 21 | 147 | 6.4E-35 | IPR036427 |
| SMART | SM00297 | bromo_6 | 21 | 129 | 1.6E-23 | IPR001487 |
| ProSiteProfiles | PS50014 | Bromodomain profile. | 40 | 110 | 18.212 | IPR001487 |
| ProSitePatterns | PS00633 | Bromodomain signature. | 45 | 102 | - | IPR018359 |
| PRINTS | PR00503 | Bromodomain signature | 91 | 110 | 5.6E-10 | IPR001487 |
| PRINTS | PR00503 | Bromodomain signature | 57 | 73 | 5.6E-10 | IPR001487 |
| PRINTS | PR00503 | Bromodomain signature | 73 | 91 | 5.6E-10 | IPR001487 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 550 | 587 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 507 | 537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 607 | 630 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 559 | 582 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 507 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 607 | 643 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 26 | - | - |
| Coils | Coil | Coil | 760 | 794 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01970.1 | 0 | |
| RefSeq | XP_021723330.1 | uncharacterized protein LOC110690747 isoform X1 [Chenopodium quinoa] | 0 |
| Q7JVP4 | Bromodomain-containing protein homolog OS=Drosophila melanogaster OX=7227 GN=Br140 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L3L5 | Bromo domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology