Basic Information
Locus ID:
Ah031551
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 96767381 | 96776823 | + | Ah031551 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 105,632.22 Da | 38.80 | 74.10 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 383 | 397 | 0.0076 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 380 | 847 | 1.8E-22 | - |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 27 | 134 | 3.79E-11 | IPR036404 |
| Gene3D | G3DSA:2.120.10.30 | - | 602 | 883 | 1.9E-16 | IPR011042 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 168 | 6.9E-13 | IPR036404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 207 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 207 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_010675830.1 | uncharacterized protein LOC104891773 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0K9RLY4 | Peptidase_S9 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_051710 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology