Basic Information
Locus ID:
Ah031413
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 94762778 | 94768952 | - | Ah031413 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.48 | 73,204.23 Da | 32.29 | 95.94 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 356 | 621 | 1.6E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 332 | 623 | 1.04E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 423 | 635 | 2.1E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 329 | 422 | 1.6E-25 | - |
| SMART | SM00220 | serkin_6 | 352 | 624 | 2.0E-42 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 352 | 638 | 37.756874 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 358 | 379 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 467 | 479 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021850694.1 | lysM domain receptor-like kinase 3 [Spinacia oleracea] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RWX1 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_024950 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology