Basic Information
Locus ID:
Ah031039
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Glutelin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 89082796 | 89087459 | - | Ah031039 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 38,708.81 Da | 37.16 | 88.50 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 6 | 176 | 4.44098E-68 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 201 | 356 | 8.44395E-82 | - |
| Pfam | PF00190 | Cupin | 202 | 340 | 4.2E-24 | IPR006045 |
| Pfam | PF00190 | Cupin | 20 | 159 | 1.0E-26 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 45 | 348 | 2.36E-50 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 198 | 359 | 2.4E-53 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 6 | 197 | 5.7E-35 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 6 | 160 | 3.3E-31 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 198 | 342 | 3.8E-18 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 214 | 234 | 5.4E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 279 | 294 | 5.4E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 319 | 336 | 5.4E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 297 | 315 | 5.4E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 261 | 277 | 5.4E-16 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_021728691.1 | 12S seed storage globulin 1-like [Chenopodium quinoa] | 0 |
| Q8GZP6 | 11S globulin seed storage protein Ana o 2.0101 (Fragment) OS=Anacardium occidentale OX=171929 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MQG8 | 11S globulin OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology