Basic Information
Locus ID:
Ah030830
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 83169169 | 83172908 | - | Ah030830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 24,798.10 Da | 47.83 | 95.40 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 171 | 221 | 2.2E-16 | IPR000719 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 28 | 84 | 8.2E-10 | IPR020683 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 25 | 135 | 4.66E-18 | IPR036770 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 165 | 220 | 5.26E-19 | IPR011009 |
| Gene3D | G3DSA:1.25.40.20 | - | 13 | 156 | 1.7E-25 | IPR036770 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 157 | 224 | 9.8E-18 | - |
| SMART | SM00248 | ANK_2a | 24 | 53 | 0.13 | IPR002110 |
| SMART | SM00248 | ANK_2a | 55 | 84 | 0.0065 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 29 | 56 | 9.40409 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 55 | 82 | 9.038475 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 55 | 87 | 9.778029 | IPR002110 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 39 | 224 | 14.888062 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 188 | 200 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57565.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_022976101.1 | potassium channel AKT1-like [Cucurbita maxima] | 0 |
| P61075 | Cyclin-dependent kinase 2 homolog OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J1IG00 | Potassium channel OS=Cucurbita maxima OX=3661 GN=LOC111476603 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg5811 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah019980, Ah024570, Ah030830 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.6AG0000470 |
| Arecaceae | Cocos nucifera | 1 | COCNU_07G013550 |
| Poaceae | Zea mays | 2 | Zm00001eb158010_P001, Zm00001eb266030_P001 |