Basic Information
Locus ID:
Ah030696
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 79075069 | 79095051 | - | Ah030696 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 124,027.40 Da | 49.28 | 82.05 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15539 | PHD1_AIRE | 773 | 813 | 4.22158E-20 | - |
| Pfam | PF16135 | Tify domain binding domain | 409 | 464 | 1.6E-10 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 708 | 756 | 3.1E-16 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 774 | 815 | 7.7E-9 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 862 | 918 | 6.79E-10 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 1017 | 1102 | 2.06E-5 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 768 | 819 | 3.5E-15 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 859 | 921 | 1.0E-12 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 760 | 849 | 8.9E-19 | IPR013083 |
| SMART | SM00249 | PHD_3 | 773 | 814 | 5.2E-13 | IPR001965 |
| SMART | SM00249 | PHD_3 | 861 | 918 | 0.0012 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 771 | 816 | 10.486799 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 774 | 813 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 672 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 591 | 611 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36720.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_021774585.1 | uncharacterized protein LOC110738482 [Chenopodium quinoa] | 0 |
| Q14839 | Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens OX=9606 GN=CHD4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QNE0 | PHD-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_164770 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology