Basic Information
Locus ID:
Ah030577
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
POT family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 74444426 | 74445682 | - | Ah030577 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 29,659.45 Da | 45.51 | 76.23 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04476 | RPA1_DBD_C | 70 | 230 | 2.54093E-21 | IPR013955 |
| Pfam | PF08646 | Replication factor-A C terminal domain | 82 | 228 | 5.7E-11 | IPR013955 |
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 58 | 217 | 6.68E-23 | IPR012340 |
| Gene3D | G3DSA:2.40.50.140 | - | 45 | 235 | 9.3E-30 | - |
| Gene3D | G3DSA:2.40.50.140 | - | 1 | 40 | 2.1E-6 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021863548.1 | uncharacterized protein LOC110802415 [Spinacia oleracea] | 0 |
| TrEMBL | A0A0K9RA04 | Secreted protein OS=Spinacia oleracea OX=3562 GN=SOVF_089910 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology