Basic Information
Locus ID:
Ah029164
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 15601920 | 15605204 | + | Ah029164 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 104,899.43 Da | 32.49 | 106.37 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 414 | 472 | 1.5E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 533 | 592 | 3.1E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 711 | 888 | 9.5E-36 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 101 | 160 | 1.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 478 | 520 | 1.6E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 73 | 1.8E-9 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 283 | 594 | 2.2E-68 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 702 | 932 | 6.97E-54 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 353 | 9.69E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 366 | 628 | 5.0E-79 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 180 | 1.2E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 365 | 1.7E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 286 | 3.5E-31 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 701 | 938 | 3.0E-51 | - |
| SMART | SM00369 | LRR_typ_2 | 435 | 459 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 339 | 363 | 30.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 709 | 957 | 5.5E-16 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 483 | 506 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 555 | 579 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 291 | 315 | 9.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 195 | 219 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 99 | 122 | 93.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 507 | 530 | 400.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 709 | 967 | 30.774677 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 837 | 849 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 715 | 739 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 555 | 568 | 8.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 510 | 523 | 8.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_021722175.1 | MDIS1-interacting receptor like kinase 1-like [Chenopodium quinoa] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M962 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology