Basic Information
Locus ID:
Ah029069
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 14289526 | 14290008 | + | Ah029069 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.28 | 14,778.98 Da | 35.84 | 101.23 | -0.17 |
Protein Domain:
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46290.1 | hercules receptor kinase 1. Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. | 0 |
| RefSeq | XP_008463843.1 | receptor-like protein kinase HERK 1 [Cucumis melo] | 0 |
| Q9LX66 | Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana OX=3702 GN=HERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S3CK57 | receptor-like protein kinase HERK 1 OS=Cucumis melo OX=3656 GN=LOC103501886 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 6 | Ah006924, Ah025967, Ah029039, Ah029060, Ah029069, Ah029072 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg51577, Sbi_jg51578 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000020759 |
| Asteraceae | Flaveria trinervia | 1 | Ftri1G08520 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G2172, Ceq01G2211 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl01G2412, Cgl01G2458 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno07g04300 |
| Hydrocharitaceae | Thalassia testudinum | 32 | gene.Thate01g01650, gene.Thate01g01660, gene.Thate01g01680 ... |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3AG0250360 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG008820, gene_TRIDC2BG010620 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-58004 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.413, evm.TU.Scaffold_6_RagTag.1830 |
| Zosteraceae | Zostera marina | 2 | Zosma04g11040.v3.1, Zosma06g12330.v3.1 |