Basic Information
Locus ID:
Ah029039
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 13919673 | 13920154 | - | Ah029039 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.81 | 14,581.95 Da | 53.14 | 93.62 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 82 | 9.36E-10 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 86 | 1.3E-6 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015076850.1 | receptor-like protein kinase HERK 1 [Solanum pennellii] | 0 |
| TrEMBL | E1AP07 | Pto-like protein kinase (Fragment) OS=Capsicum annuum OX=4072 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 6 | Ah006924, Ah025967, Ah029039, Ah029060, Ah029069, Ah029072 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg51577, Sbi_jg51578 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000020759 |
| Asteraceae | Flaveria trinervia | 1 | Ftri1G08520 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G2172, Ceq01G2211 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl01G2412, Cgl01G2458 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno07g04300 |
| Hydrocharitaceae | Thalassia testudinum | 32 | gene.Thate01g01650, gene.Thate01g01660, gene.Thate01g01680 ... |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3AG0250360 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG008820, gene_TRIDC2BG010620 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-58004 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.413, evm.TU.Scaffold_6_RagTag.1830 |
| Zosteraceae | Zostera marina | 2 | Zosma04g11040.v3.1, Zosma06g12330.v3.1 |