Basic Information
Locus ID:
Ah028837
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 11637371 | 11650632 | + | Ah028837 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.18 | 151,348.81 Da | 46.03 | 72.93 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 15 | 155 | 1.60874E-48 | - |
| Pfam | PF00069 | Protein kinase domain | 1092 | 1344 | 1.0E-40 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 486 | 720 | 4.0E-29 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 15 | 130 | 8.37E-9 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1069 | 1345 | 1.48E-68 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 457 | 723 | 5.4E-61 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1067 | 1161 | 1.7E-26 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 12 | 143 | 5.6E-8 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 457 | 508 | 4.6E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 509 | 540 | 1.4E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1162 | 1359 | 2.1E-49 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 541 | 735 | 1.6E-48 | - |
| SMART | SM00220 | serkin_6 | 1089 | 1353 | 5.1E-30 | IPR000719 |
| SMART | SM00220 | serkin_6 | 480 | 728 | 2.9E-18 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1089 | 1353 | 35.014877 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 480 | 727 | 29.33301 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 582 | 594 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1207 | 1219 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 232 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 772 | 852 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 384 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 274 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 932 | 963 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 932 | 958 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 229 | - | - |
| Coils | Coil | Coil | 422 | 449 | - | - |
| Coils | Coil | Coil | 960 | 980 | - | - |
| Coils | Coil | Coil | 1034 | 1062 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G26150.2 | - | 0 |
| RefSeq | XP_021716489.1 | U-box domain-containing protein 35-like [Chenopodium quinoa] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LDB8 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah028837 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.7AG0005910, CQ.Regalona.r1.9BG0005830 |