Basic Information
Locus ID:
Ah028702
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 10037470 | 10051333 | - | Ah028702 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 197,260.98 Da | 44.56 | 73.75 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1484 | 1747 | 1.01195E-151 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 391 | 663 | 1.16016E-135 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1523 | 1690 | 6.1E-35 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 397 | 653 | 2.2E-32 | IPR002423 |
| Pfam | PF01363 | FYVE zinc finger | 33 | 99 | 8.5E-17 | IPR000306 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1691 | 1745 | 5.5E-7 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 457 | 629 | 1.1E-41 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1464 | 1748 | 1.8E-80 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 31 | 102 | 1.25E-19 | IPR011011 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 456 | 629 | 1.0E-53 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1606 | 1748 | 1.3E-41 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1439 | 1604 | 3.8E-37 | IPR027484 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 20 | 105 | 6.7E-21 | IPR013083 |
| SMART | SM00330 | PIPK_2 | 1461 | 1748 | 2.3E-127 | IPR002498 |
| SMART | SM00064 | fyve_4 | 28 | 103 | 2.3E-21 | IPR000306 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1428 | 1747 | 58.728958 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 42 | 102 | 12.693618 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 203 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 230 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 223 | - | - |
| Coils | Coil | Coil | 1097 | 1117 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_021761873.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like [Chenopodium quinoa] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9S494 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Spinacia oleracea OX=3562 GN=SOVF_001970 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology