Basic Information
Locus ID:
Ah028675
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 9829424 | 9837878 | + | Ah028675 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 77,090.32 Da | 39.78 | 89.79 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 416 | 681 | 4.5E-39 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 68 | 9.4E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 116 | 176 | 2.0E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 395 | 681 | 1.5E-67 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 232 | 5.35E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 254 | 3.2E-48 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 385 | 490 | 1.5E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 492 | 707 | 2.6E-52 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 414 | 684 | 33.318798 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 189 | 211 | 7.1113 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 692 | 712 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 276 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14350.1 | STRUBBELIG-receptor family 7. | 0 |
| RefSeq | XP_021761852.1 | protein STRUBBELIG-RECEPTOR FAMILY 7-like [Chenopodium quinoa] | 0 |
| Q9LUL4 | Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana OX=3702 GN=SRF7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M9M6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology