Basic Information
Locus ID:
Ah028577
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 8972595 | 8983832 | + | Ah028577 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 149,093.09 Da | 41.18 | 86.41 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 605 | 753 | 3.82697E-51 | - |
| Pfam | PF00069 | Protein kinase domain | 1027 | 1281 | 9.6E-41 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 350 | 544 | 1.3E-22 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 77 | 1.9E-10 | IPR013210 |
| Pfam | PF00582 | Universal stress protein family | 606 | 729 | 2.5E-7 | IPR006016 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 240 | 3.3E-29 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 606 | 742 | 1.26E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1002 | 1284 | 3.01E-68 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 348 | 544 | 1.5E-42 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 602 | 754 | 6.3E-9 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 311 | 419 | 1.1E-13 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 993 | 1095 | 1.1E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 200 | 241 | 7.0E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 198 | 1.0E-38 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 420 | 601 | 2.8E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1096 | 1303 | 2.1E-49 | - |
| SMART | SM00220 | serkin_6 | 1023 | 1289 | 1.0E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 344 | 619 | 24.159966 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1023 | 1301 | 35.820515 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1141 | 1153 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1311 | 1330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 867 | 886 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 787 | 813 | - | - |
| Coils | Coil | Coil | 970 | 990 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78940.3 | - | 0 |
| RefSeq | XP_021720015.1 | U-box domain-containing protein 52-like [Chenopodium quinoa] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KQL3 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology