Basic Information
Locus ID:
Ah028504
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 7964808 | 7966800 | - | Ah028504 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 66,755.33 Da | 35.38 | 104.40 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 136 | 340 | 2.28E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 52 | 2.62E-9 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 121 | 354 | 1.3E-10 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 6 | 49 | 1.7E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 62 | 9.523964 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59000.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_021755129.1 | F-box/FBD/LRR-repeat protein At5g56420-like [Chenopodium quinoa] | 0 |
| Q2V3N5 | F-box protein At3g59000 OS=Arabidopsis thaliana OX=3702 GN=At3g59000 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803M4E2 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology