Basic Information
Locus ID:
Ah028102
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Glutelin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 3936975 | 3939511 | - | Ah028102 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 38,823.95 Da | 31.42 | 87.28 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02243 | cupin_11S_legumin_C | 198 | 353 | 2.95548E-76 | - |
| CDD | cd02242 | cupin_11S_legumin_N | 3 | 173 | 7.51377E-71 | - |
| Pfam | PF00190 | Cupin | 199 | 338 | 1.5E-22 | IPR006045 |
| Pfam | PF00190 | Cupin | 11 | 154 | 4.9E-29 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 16 | 345 | 1.75E-49 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 195 | 356 | 2.4E-51 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 4 | 194 | 1.3E-33 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 3 | 157 | 1.9E-33 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 195 | 339 | 3.1E-18 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 316 | 333 | 6.0E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 258 | 274 | 6.0E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 211 | 231 | 6.0E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 276 | 291 | 6.0E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 294 | 312 | 6.0E-15 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_021716228.1 | 11S globulin seed storage protein 2-like [Chenopodium quinoa] | 0 |
| P07728 | Glutelin type-A 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GLUA1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LCP3 | 11-S seed storage protein, plant OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology