Basic Information
Locus ID:
Ah028004
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 2982065 | 2989542 | - | Ah028004 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 29,271.94 Da | 51.06 | 65.72 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 34 | 130 | 2.9E-42 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 55 | 128 | 3.4E-34 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 171 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 264 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29070.1 | Ubiquitin fusion degradation UFD1 family protein. | 0 |
| RefSeq | XP_021716112.1 | ubiquitin recognition factor in ER-associated degradation protein 1-like [Chenopodium quinoa] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LCF7 | Ubiquitin fusion degradation protein 1 homolog OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology