Basic Information
Locus ID:
Ah027817
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1313_HRSCAF_2064 | 1320774 | 1354417 | - | Ah027817 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 173,830.78 Da | 49.51 | 76.24 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04301 | NAT_SF | 1255 | 1315 | 2.25436E-4 | - |
| Pfam | PF03171 | 2OG-Fe(II) oxygenase superfamily | 208 | 274 | 1.0E-12 | IPR044861 |
| Pfam | PF05641 | Agenet domain | 266 | 340 | 1.3E-11 | IPR008395 |
| Pfam | PF16135 | Tify domain binding domain | 978 | 1028 | 1.4E-16 | IPR032308 |
| Pfam | PF14226 | non-haem dioxygenase in morphine synthesis N-terminal | 47 | 150 | 9.4E-14 | IPR026992 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 1250 | 1359 | 6.34E-8 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 1044 | 1099 | 4.73E-11 | IPR011011 |
| SUPERFAMILY | SSF51197 | Clavaminate synthase-like | 41 | 273 | 8.24E-52 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1100 | 1160 | 3.0E-5 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1017 | 1099 | 1.9E-13 | IPR013083 |
| Gene3D | G3DSA:2.60.120.330 | - | 45 | 283 | 3.1E-49 | IPR027443 |
| Gene3D | G3DSA:3.40.630.30 | - | 1223 | 1359 | 2.1E-6 | - |
| SMART | SM00249 | PHD_3 | 1058 | 1099 | 4.8E-8 | IPR001965 |
| SMART | SM00249 | PHD_3 | 1100 | 1158 | 0.51 | IPR001965 |
| SMART | SM00743 | agenet_At_2 | 261 | 330 | 27.0 | IPR014002 |
| SMART | SM00743 | agenet_At_2 | 348 | 405 | 5.9E-5 | IPR014002 |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 1197 | 1360 | 10.412162 | IPR000182 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 1056 | 1101 | 9.783699 | IPR019787 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 201 | 332 | 10.590844 | IPR005123 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 1097 | 1160 | 8.7068 | IPR019787 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 581 | 605 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 866 | 889 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 578 | 605 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 814 | 834 | - | - |
| Coils | Coil | Coil | 1021 | 1041 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58610.2 | - | 0 |
| RefSeq | XP_021720653.1 | uncharacterized protein LOC110688241 isoform X1 [Chenopodium quinoa] | 0 |
| F4IXE7 | Increased DNA methylation 1 OS=Arabidopsis thaliana OX=3702 GN=IDM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KRG7 | PHD-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology