Basic Information
Locus ID:
Ah026904
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Serine threonine-protein phosphatase 7 long form homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1281_HRSCAF_1836 | 90824845 | 90825789 | + | Ah026904 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.52 | 30,434.42 Da | 54.27 | 118.04 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48120.1 | hydrolases;protein serine/threonine phosphatases. | 0 |
| RefSeq | XP_021771311.1 | serine/threonine-protein phosphatase 7 long form homolog [Chenopodium quinoa] | 0 |
| Q9LNG5 | Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MN78 | C2H2-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_22859, gene_3677, gene_6214 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah006596, Ah026904, Ah033066 |
| Amaranthaceae | Salicornia bigelovii | 69 | Sbi_jg10574, Sbi_jg13161, Sbi_jg14289, Sbi_jg1461, Sbi_jg387 ... |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg15751, Seu_jg21945 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00026342 |
| Apiaceae | Apium graveolens | 1 | Ag9G00627 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb2G10686, Lb3G16601 |
| Poaceae | Oryza coarctata | 2 | Oco13G014430, Oco16G012190 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132599869, gene-LOC132609715, gene-LOC132622063 |
| Solanaceae | Solanum chilense | 2 | SOLCI003030300, SOLCI005764100 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC114074771, gene-LOC114075281, gene-LOC114078436 |