Basic Information
Locus ID:
Ah026763
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1281_HRSCAF_1836 | 89148099 | 89149553 | - | Ah026763 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 52,152.02 Da | 44.32 | 83.14 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12202 | Oxidative-stress-responsive kinase 1 C-terminal domain | 326 | 382 | 8.5E-5 | IPR024678 |
| Pfam | PF00069 | Protein kinase domain | 27 | 159 | 1.9E-17 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 242 | 7.86E-40 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 324 | 414 | 1.6E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 84 | 4.9E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 162 | 247 | 5.9E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 88 | 161 | 9.3E-12 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 241 | 22.492153 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 455 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 455 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41990.1 | with no lysine (K) kinase 8. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Interacts specifically with and phosphorylates AtVHA-C, subunit C of the vacuolar H+-ATPase. | 0 |
| RefSeq | XP_021775211.1 | probable serine/threonine-protein kinase WNK11 [Chenopodium quinoa] | 0 |
| Q6EU49 | Probable serine/threonine-protein kinase WNK4 OS=Oryza sativa subsp. japonica OX=39947 GN=WNK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MCG6 | non-specific serine/threonine protein kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah026763 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000001543, gene:ENSEOMG00000002833 ... |