Basic Information
Locus ID:
Ah026611
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Short Name:
LYK4
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1281_HRSCAF_1836 | 87482303 | 87487602 | + | Ah026611 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 126,846.46 Da | 40.18 | 90.95 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 690 | 735 | 0.00537275 | IPR018392 |
| Pfam | PF01476 | LysM domain | 692 | 736 | 1.2E-4 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 373 | 456 | 1.2E-14 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 889 | 1132 | 1.2E-36 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 306 | 457 | 1.8E-31 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 848 | 1134 | 1.52E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 934 | 1143 | 1.0E-50 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 687 | 746 | 6.1E-7 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 356 | 502 | 1.8E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 844 | 933 | 5.1E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 303 | 354 | 7.5E-6 | - |
| SMART | SM00257 | LysM_2 | 563 | 609 | 20.0 | IPR018392 |
| SMART | SM00257 | LysM_2 | 691 | 736 | 4.0E-4 | IPR018392 |
| SMART | SM00220 | serkin_6 | 843 | 1139 | 5.0E-24 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 690 | 735 | 11.767154 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 843 | 1138 | 31.820593 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 226 | 525 | 14.2803 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_021758038.1 | lysM domain receptor-like kinase 4 [Chenopodium quinoa] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KVZ9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology