Basic Information
Locus ID:
Ah026410
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1281_HRSCAF_1836 | 85486044 | 85488848 | - | Ah026410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.14 | 102,415.05 Da | 37.04 | 101.21 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 662 | 930 | 1.29462E-86 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 75 | 5.0E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 252 | 311 | 1.1E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 659 | 925 | 2.1E-43 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 357 | 3.4E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 635 | 927 | 5.4E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 374 | 475 | 1.25E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 104 | 1.0E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 133 | 473 | 5.6E-75 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 617 | 731 | 3.5E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 732 | 931 | 7.5E-58 | - |
| SMART | SM00220 | serkin_6 | 656 | 933 | 8.2E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 656 | 930 | 38.576645 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 662 | 684 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 776 | 788 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_021756718.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Chenopodium quinoa] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KVN7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology