HalophFGD

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Basic Information
Locus ID: Ah026313
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description: Seven in absentia protein family
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_1281_HRSCAF_1836 83775661 83776807 + Ah026313
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.81 21,658.32 Da 58.39 88.74 -0.10
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
KEGG Pathway
KO Term:
K04506 (E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27])
Pathway:
ko04013 (MAPK signaling pathway - fly) map04013 (MAPK signaling pathway - fly) map04115 (p53 signaling pathway) ko04120 (Ubiquitin mediated proteolysis) map04120 (Ubiquitin mediated proteolysis) ko04310 (Wnt signaling pathway) map04310 (Wnt signaling pathway)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021722345.1 uncharacterized protein LOC110689827 [Chenopodium quinoa] 0
TrEMBL A0A803M9J0 ULP_PROTEASE domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 97 Ah000691, Ah000692, Ah002157, Ah002158, Ah002744, Ah002745 ...
Ah006601, Ah008027, Ah008048, Ah008049, Ah008050, Ah008051, Ah008052, Ah008053, Ah008076, Ah008077, Ah008078, Ah008083, Ah008085, Ah008285, Ah008286, Ah008287, Ah008288, Ah010867, Ah010869, Ah011389, Ah011390, Ah011741, Ah011742, Ah011743, Ah011807, Ah012484, Ah013317, Ah015272, Ah015273, Ah015274, Ah015314, Ah017635, Ah019847, Ah019918, Ah020007, Ah020008, Ah020979, Ah021027, Ah022567, Ah022569, Ah024805, Ah025051, Ah025052, Ah025145, Ah025146, Ah025241, Ah025242, Ah025571, Ah025579, Ah025580, Ah025581, Ah026297, Ah026313, Ah030550, Ah030551, Ah030554, Ah030555, Ah030740, Ah030741, Ah030742, Ah030964, Ah030965, Ah030966, Ah031041, Ah031059, Ah031103, Ah031223, Ah032137, Ah032141, Ah032142, Ah032218, Ah032219, Ah033207, Ah033609, Ah034022, Ah034023, Ah034024, Ah034242, Ah034366, Ah036289, Ah036290, Ah036291, Ah036343, Ah036344, Ah036400, Ah036401, Ah036819, Ah037804, Ah037805, Ah037918, Ah037919
Amaranthaceae Chenopodium quinoa 1 CQ.Regalona.r1.7AG0012940
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.