Basic Information
Locus ID:
Ah026311
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1281_HRSCAF_1836 | 83745699 | 83754777 | - | Ah026311 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 90,466.02 Da | 43.10 | 77.89 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 93 | 289 | 4.88719E-102 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 107 | 266 | 2.8E-13 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 271 | 772 | 4.6E-193 | IPR001404 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 84 | 299 | 2.36E-62 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 622 | 744 | 2.48E-33 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 342 | 600 | 1.44E-89 | IPR020568 |
| Gene3D | G3DSA:3.30.565.10 | - | 70 | 313 | 1.4E-90 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 340 | 512 | 8.1E-72 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 513 | 599 | 1.7E-32 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 600 | 747 | 2.7E-51 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 106 | 268 | 1.9E-7 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 48 | 787 | 2.4E-239 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 104 | 113 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 201 | 223 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 275 | 293 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 172 | 189 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 154 | 171 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 256 | 273 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 84 | 104 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 105 | 127 | 1.0E-63 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 74 | 744 | 26.152695 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 755 | 796 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 325 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_021756076.1 | heat shock protein 90-5, chloroplastic-like [Chenopodium quinoa] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L7L2 | HATPase_c domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology