Basic Information
Locus ID:
Ah025939
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1281_HRSCAF_1836 | 77181093 | 77188776 | - | Ah025939 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 40,574.09 Da | 47.05 | 76.83 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 40 | 122 | 4.9E-10 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 41 | 141 | 1.31E-22 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 26 | 146 | 1.9E-23 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 1 | 141 | 19.524439 | IPR003441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_021723887.1 | SUPPRESSOR OF GAMMA RESPONSE 1-like [Chenopodium quinoa] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RQ22 | NAC domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_042010 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology