Basic Information
Locus ID:
Ah025489
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Short Name:
OS9
Description:
retrograde protein transport, ER to cytosol
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1281_HRSCAF_1836 | 64814008 | 64818130 | + | Ah025489 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.63 | 26,969.71 Da | 54.05 | 77.55 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00627 | UBA/TS-N domain | 210 | 245 | 2.2E-8 | IPR015940 |
| SUPERFAMILY | SSF46934 | UBA-like | 198 | 246 | 5.64E-7 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 202 | 247 | 1.4E-10 | - |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 35 | 106 | 2.8E-11 | IPR036259 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 204 | 248 | 10.595029 | IPR015940 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02040.1 | peptide transporter 2. Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays. | 0 |
| RefSeq | XP_021754095.1 | ubiquitin receptor RAD23c-like isoform X3 [Chenopodium quinoa] | 0 |
| P46032 | Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana OX=3702 GN=NPF8.3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LX11 | MRH domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology