Basic Information
Locus ID:
Ah025338
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1281_HRSCAF_1836 | 59514972 | 59524879 | - | Ah025338 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 191,533.97 Da | 52.65 | 78.62 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1433 | 1696 | 2.18067E-144 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 380 | 652 | 3.98831E-128 | - |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 401 | 648 | 5.4E-32 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1640 | 1694 | 8.9E-7 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1472 | 1638 | 1.8E-34 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 446 | 618 | 1.15E-38 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1427 | 1696 | 3.92E-80 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 445 | 618 | 6.4E-51 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1554 | 1697 | 1.3E-42 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1394 | 1553 | 5.7E-35 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1410 | 1697 | 1.0E-117 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1370 | 1696 | 58.599758 | IPR002498 |
| Coils | Coil | Coil | 482 | 502 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_021727305.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Chenopodium quinoa] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LJQ8 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology