HalophFGD

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Basic Information
Locus ID: Ah025145
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_1281_HRSCAF_1836 49808289 49808909 - Ah025145
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.87 12,861.76 Da 57.83 92.23 -0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF02902 Ulp1 protease family, C-terminal catalytic domain 8 71 2.7E-4 IPR003653
SUPERFAMILY SSF54001 Cysteine proteinases 21 93 3.73E-8 IPR038765
Gene3D G3DSA:3.40.395.10 Adenoviral Proteinase; Chain A 3 110 1.4E-7 -
Gene Ontology
Biological Process:
GO:0006508 (proteolysis)
Molecular Function:
GO:0008234 (cysteine-type peptidase activity)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021861646.1 uncharacterized protein LOC110800645 [Spinacia oleracea] 0
TrEMBL A0A0K9RBD0 ULP_PROTEASE domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_085830 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 97 Ah000691, Ah000692, Ah002157, Ah002158, Ah002744, Ah002745 ...
Ah006601, Ah008027, Ah008048, Ah008049, Ah008050, Ah008051, Ah008052, Ah008053, Ah008076, Ah008077, Ah008078, Ah008083, Ah008085, Ah008285, Ah008286, Ah008287, Ah008288, Ah010867, Ah010869, Ah011389, Ah011390, Ah011741, Ah011742, Ah011743, Ah011807, Ah012484, Ah013317, Ah015272, Ah015273, Ah015274, Ah015314, Ah017635, Ah019847, Ah019918, Ah020007, Ah020008, Ah020979, Ah021027, Ah022567, Ah022569, Ah024805, Ah025051, Ah025052, Ah025145, Ah025146, Ah025241, Ah025242, Ah025571, Ah025579, Ah025580, Ah025581, Ah026297, Ah026313, Ah030550, Ah030551, Ah030554, Ah030555, Ah030740, Ah030741, Ah030742, Ah030964, Ah030965, Ah030966, Ah031041, Ah031059, Ah031103, Ah031223, Ah032137, Ah032141, Ah032142, Ah032218, Ah032219, Ah033207, Ah033609, Ah034022, Ah034023, Ah034024, Ah034242, Ah034366, Ah036289, Ah036290, Ah036291, Ah036343, Ah036344, Ah036400, Ah036401, Ah036819, Ah037804, Ah037805, Ah037918, Ah037919
Amaranthaceae Chenopodium quinoa 1 CQ.Regalona.r1.7AG0012940
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.