Basic Information
Locus ID:
Ah024303
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1281_HRSCAF_1836 | 20541014 | 20543020 | + | Ah024303 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 75,535.40 Da | 41.86 | 85.33 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 29 | 250 | 6.9243E-61 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 28 | 249 | 2.6E-52 | IPR001220 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 350 | 614 | 2.0E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 328 | 617 | 3.14E-71 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 27 | 250 | 3.82E-50 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 424 | 628 | 3.6E-57 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 13 | 251 | 9.0E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 310 | 423 | 5.4E-26 | - |
| SMART | SM00220 | serkin_6 | 347 | 617 | 4.6E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 347 | 626 | 33.756954 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 470 | 482 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021771446.1 | L-type lectin-domain containing receptor kinase S.6-like [Chenopodium quinoa] | 0 |
| Q9FHX3 | L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9R9V1 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_090070 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology