Basic Information
Locus ID:
Ah024112
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1281_HRSCAF_1836 | 16297520 | 16298596 | + | Ah024112 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 32,503.07 Da | 40.59 | 94.07 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 25 | 166 | 2.6E-23 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 19 | 252 | 3.37E-36 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 182 | 256 | 1.8E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 6 | 104 | 1.9E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 106 | 173 | 5.4E-12 | - |
| SMART | SM00220 | serkin_6 | 22 | 252 | 1.4E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 22 | 285 | 18.5205 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 149 | 161 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49160.2 | Protein kinase superfamily protein. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its | 0 |
| RefSeq | XP_021771478.1 | serine/threonine-protein kinase WNK8-like [Chenopodium quinoa] | 0 |
| Q8LST2 | Probable serine/threonine-protein kinase WNK7 OS=Arabidopsis thaliana OX=3702 GN=WNK7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803NEQ1 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah024112 |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.1AG0015090, CQ.Regalona.r1.1AG0015150 ... |