Basic Information
Locus ID:
Ah023124
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1281_HRSCAF_1836 | 5206578 | 5231878 | - | Ah023124 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 193,438.08 Da | 41.25 | 86.19 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00030 | C2 | 266 | 366 | 6.89651E-28 | - |
| Pfam | PF07859 | alpha/beta hydrolase fold | 1511 | 1722 | 3.7E-37 | IPR013094 |
| Pfam | PF00069 | Protein kinase domain | 548 | 719 | 1.5E-22 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1021 | 1134 | 5.4E-6 | IPR001245 |
| Pfam | PF00168 | C2 domain | 264 | 360 | 9.0E-21 | IPR000008 |
| Pfam | PF07859 | alpha/beta hydrolase fold | 1221 | 1430 | 8.3E-32 | IPR013094 |
| Pfam | PF17047 | Synaptotagmin-like mitochondrial-lipid-binding domain | 68 | 248 | 3.0E-17 | IPR039010 |
| SUPERFAMILY | SSF53474 | alpha/beta-Hydrolases | 1156 | 1442 | 5.87E-34 | IPR029058 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 525 | 1160 | 4.54E-57 | IPR011009 |
| SUPERFAMILY | SSF53474 | alpha/beta-Hydrolases | 1445 | 1725 | 6.83E-35 | IPR029058 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 262 | 392 | 6.7E-28 | IPR035892 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 998 | 1140 | 5.0E-27 | - |
| Gene3D | G3DSA:3.40.50.1820 | alpha/beta hydrolase | 1156 | 1306 | 2.7E-32 | IPR029058 |
| Gene3D | G3DSA:3.40.50.1820 | alpha/beta hydrolase | 1445 | 1750 | 1.2E-61 | IPR029058 |
| Gene3D | G3DSA:3.40.50.1820 | alpha/beta hydrolase | 1307 | 1444 | 6.4E-23 | IPR029058 |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 259 | 419 | 2.9E-30 | IPR035892 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 641 | 774 | 5.6E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 515 | 639 | 6.4E-18 | - |
| SMART | SM00220 | serkin_6 | 546 | 1134 | 6.1E-20 | IPR000719 |
| SMART | SM00239 | C2_3c | 265 | 362 | 2.2E-21 | IPR000008 |
| ProSiteProfiles | PS51847 | Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. | 66 | 249 | 23.594685 | IPR031468 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 247 | 365 | 20.740463 | IPR000008 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 546 | 1145 | 27.49559 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 552 | 575 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 687 | 699 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61050.1 | Calcium-dependent lipid-binding (CaLB domain) family protein. | 0 |
| RefSeq | XP_021748565.1 | receptor-like serine/threonine-protein kinase At2g45590 [Chenopodium quinoa] | 0 |
| Q9LEX1 | Calcium-dependent lipid-binding protein OS=Arabidopsis thaliana OX=3702 GN=CLB PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N9W0 | Synaptotagmin-2 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology