Basic Information
Locus ID:
Ah022999
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1281_HRSCAF_1836 | 4110735 | 4116690 | - | Ah022999 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 90,145.06 Da | 45.47 | 81.01 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 26 | 179 | 1.13148E-40 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 726 | 767 | 2.39058E-23 | - |
| Pfam | PF04564 | U-box domain | 722 | 792 | 1.1E-17 | IPR003613 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 454 | 693 | 2.8E-29 | IPR001245 |
| SUPERFAMILY | SSF57850 | RING/U-box | 711 | 792 | 4.41E-25 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 41 | 160 | 2.34E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 426 | 694 | 1.66E-50 | IPR011009 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 720 | 792 | 7.0E-29 | IPR013083 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 429 | 516 | 7.2E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 517 | 712 | 5.2E-37 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 26 | 173 | 1.5E-6 | IPR014729 |
| SMART | SM00504 | Ubox_2 | 725 | 788 | 5.5E-30 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 721 | 792 | 39.480125 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 444 | 704 | 24.852531 | IPR000719 |
| Coils | Coil | Coil | 394 | 414 | - | - |
| Coils | Coil | Coil | 324 | 358 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_021748908.1 | U-box domain-containing protein 33-like [Chenopodium quinoa] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9RIX6 | Serine/threonine-protein kinase OS=Spinacia oleracea OX=3562 GN=SOVF_061320 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology