Basic Information
Locus ID:
Ah022909
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Alpha,alpha-trehalose-phosphate synthase UDP-forming 1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1281_HRSCAF_1836 | 3314256 | 3326881 | - | Ah022909 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 23,377.81 Da | 35.32 | 81.58 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF117289 | Nucleoporin domain | 149 | 199 | 4.71E-6 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 143 | 203 | 7.9E-10 | IPR015943 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78580.1 | trehalose-6-phosphate synthase. Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division. | 0 |
| RefSeq | XP_021721576.1 | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like isoform X2 [Chenopodium quinoa] | 0 |
| Q9SYM4 | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana OX=3702 GN=TPS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MVB2 | Integrase_H2C2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 3 | Ah012173, Ah020294, Ah022909 |
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0004_0180.v2.2 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2BG013740, gene_TRIDC6BG040670 |