HalophFGD

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Basic Information
Locus ID: Ah022636
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description: F-box domain
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_1281_HRSCAF_1836 766536 767759 - Ah022636
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.35 46,353.33 Da 38.31 82.36 -0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 9 51 3.79E-8 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G06240.1 F-box family protein. 0
RefSeq XP_021717831.1 F-box/kelch-repeat protein At3g23880-like [Chenopodium quinoa] 0
TrEMBL A0A803MAH4 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 9 Ah018602, Ah018642, Ah019997, Ah021970, Ah021971, Ah022635 ...
Ah022636, Ah022637, Ah035999
Amaranthaceae Salicornia bigelovii 2 Sbi_jg56203, Sbi_jg56204
Amaranthaceae Salicornia europaea 1 Seu_jg26671
Amaranthaceae Suaeda aralocaspica 11 GOSA_00014153, GOSA_00014155, GOSA_00014156, GOSA_00014159 ...
GOSA_00014160, GOSA_00014161, GOSA_00014162, GOSA_00014163, GOSA_00014164, GOSA_00015872, GOSA_00029277
Amaranthaceae Suaeda glauca 18 Sgl12082, Sgl12087, Sgl12088, Sgl12091, Sgl12194, Sgl12277 ...
Sgl12284, Sgl12289, Sgl14574, Sgl17376, Sgl17381, Sgl17383, Sgl17384, Sgl17507, Sgl17514, Sgl17566, Sgl19735, Sgl19745
Amaranthaceae Chenopodium album 2 gene:ENSEOMG00000015744, gene:ENSEOMG00000043764
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.3AG0015240, CQ.Regalona.r1.3BG0014600
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.