Basic Information
Locus ID:
Ah022007
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_390_HRSCAF_510 | 92104186 | 92109316 | + | Ah022007 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 32,273.24 Da | 24.18 | 102.83 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 14 | 230 | 8.0E-70 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 13 | 224 | 1.9E-30 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 4 | 289 | 4.4E-80 | IPR027417 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 165 | 235 | 16.113813 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 1 | 154 | 20.470806 | IPR020588 |
| PRINTS | PR00142 | RecA protein signature | 206 | 235 | 5.9E-54 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 125 | 154 | 5.9E-54 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 173 | 201 | 5.9E-54 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 53 | 82 | 5.9E-54 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 87 | 116 | 5.9E-54 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_021741071.1 | DNA repair protein recA homolog 2, mitochondrial-like isoform X2 [Chenopodium quinoa] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MAJ9 | RECA_2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology