Basic Information
Locus ID:
Ah021998
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
response regulator
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_390_HRSCAF_510 | 91735375 | 91747255 | + | Ah021998 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.71 | 43,251.92 Da | 42.87 | 101.60 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17546 | REC_hyHK_CKI1_RcsC-like | 19 | 128 | 2.78167E-27 | - |
| CDD | cd17546 | REC_hyHK_CKI1_RcsC-like | 279 | 388 | 7.76821E-26 | - |
| CDD | cd17546 | REC_hyHK_CKI1_RcsC-like | 149 | 258 | 4.24128E-26 | - |
| Pfam | PF00072 | Response regulator receiver domain | 149 | 258 | 1.0E-17 | IPR001789 |
| Pfam | PF00072 | Response regulator receiver domain | 19 | 126 | 2.4E-18 | IPR001789 |
| Pfam | PF00072 | Response regulator receiver domain | 279 | 386 | 6.1E-18 | IPR001789 |
| SUPERFAMILY | SSF52172 | CheY-like | 278 | 392 | 5.83E-25 | IPR011006 |
| SUPERFAMILY | SSF52172 | CheY-like | 18 | 132 | 1.41E-25 | IPR011006 |
| SUPERFAMILY | SSF52172 | CheY-like | 148 | 262 | 6.26E-25 | IPR011006 |
| Gene3D | G3DSA:3.40.50.2300 | - | 270 | 393 | 1.1E-26 | - |
| Gene3D | G3DSA:3.40.50.2300 | - | 9 | 135 | 8.9E-28 | - |
| Gene3D | G3DSA:3.40.50.2300 | - | 141 | 266 | 5.5E-27 | - |
| SMART | SM00448 | REC_2 | 16 | 128 | 7.3E-20 | IPR001789 |
| SMART | SM00448 | REC_2 | 276 | 388 | 3.0E-18 | IPR001789 |
| SMART | SM00448 | REC_2 | 146 | 258 | 7.7E-19 | IPR001789 |
| ProSiteProfiles | PS50110 | Response regulatory domain profile. | 17 | 132 | 32.507141 | IPR001789 |
| ProSiteProfiles | PS50110 | Response regulatory domain profile. | 147 | 262 | 31.736027 | IPR001789 |
| ProSiteProfiles | PS50110 | Response regulatory domain profile. | 277 | 392 | 31.727163 | IPR001789 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G26594.1 | response regulator 24. Encodes an atypical subtype of the ARR (Arabidopsis response regulator) protein family . It appears to be expressed in floral buds, mature flowers, and pollen. But, unlike the related ARR22 protein, it does not appear to be expressed at the seed:funiculus junction. | 0 |
| RefSeq | XP_021740841.1 | two-component response regulator ARR22-like [Chenopodium quinoa] | 0 |
| F4JZT3 | Two-component response regulator 24 OS=Arabidopsis thaliana OX=3702 GN=ARR24 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MAJ4 | Response regulatory domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology