Basic Information
Locus ID:
Ah020886
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_390_HRSCAF_510 | 55397726 | 55410327 | + | Ah020886 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.63 | 28,897.16 Da | 28.51 | 84.73 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 222 | 247 | 7.31E-5 | IPR036770 |
| Gene3D | G3DSA:3.40.50.2300 | - | 124 | 207 | 7.9E-10 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 226 | 247 | 10.179323 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 226 | 247 | 10.20539 | IPR002110 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27880.1 | Argonaute family protein. | 0 |
| RefSeq | XP_021732852.1 | protein argonaute 5-like [Chenopodium quinoa] | 0 |
| Q851R2 | Protein argonaute MEL1 OS=Oryza sativa subsp. japonica OX=39947 GN=MEL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M6A6 | Protein argonaute PNH1-like OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology