Basic Information
Locus ID:
Ah020294
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Short Name:
TPS2
Description:
Alpha,alpha-trehalose-phosphate synthase (UDP-forming)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_390_HRSCAF_510 | 32086961 | 32087774 | - | Ah020294 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 12,875.47 Da | 25.76 | 89.65 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 16 | 112 | 2.39E-5 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 45 | 113 | 3.0E-7 | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78580.1 | trehalose-6-phosphate synthase. Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division. | 0 |
| RefSeq | XP_021764122.1 | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like isoform X3 [Chenopodium quinoa] | 0 |
| Q9SYM4 | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana OX=3702 GN=TPS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MVB2 | Integrase_H2C2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 3 | Ah012173, Ah020294, Ah022909 |
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0004_0180.v2.2 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2BG013740, gene_TRIDC6BG040670 |