Basic Information
Locus ID:
Ah020151
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_390_HRSCAF_510 | 28141861 | 28142103 | + | Ah020151 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.72 | 9,168.71 Da | 42.98 | 115.62 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 5 | 73 | 3.4E-15 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 73 | 8.63E-19 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 79 | 6.5E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 80 | 15.933978 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 34 | 46 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04910.2 | with no lysine (K) kinase 1. Serine/threonine protein kinase, whose transcription is regulated by circadian rhythm. | 0 |
| RefSeq | XP_023523117.1 | probable serine/threonine-protein kinase WNK9 [Cucurbita pepo subsp. pepo] | 0 |
| Q9CAV6 | Serine/threonine-protein kinase WNK1 OS=Arabidopsis thaliana OX=3702 GN=WNK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8ZZ96 | Protein kinase domain-containing protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 2 | Ah020151, Ah037754 |
| Poaceae | Zea mays | 1 | Zm00001eb340770_P001 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g18710 |
| Salicaceae | Populus euphratica | 1 | populus_peu09603 |