Basic Information
Locus ID:
Ah020008
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_390_HRSCAF_510 | 23145778 | 23148626 | + | Ah020008 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 68,568.54 Da | 45.87 | 74.75 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 437 | 522 | 4.5E-6 | IPR003653 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 411 | 527 | 5.1E-11 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 358 | 549 | 1.2E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 581 | 612 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 142 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021722345.1 | uncharacterized protein LOC110689827 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803M9J0 | ULP_PROTEASE domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.