Basic Information
Locus ID:
Ah019980
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_390_HRSCAF_510 | 22270870 | 22273575 | + | Ah019980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.55 | 7,839.26 Da | 28.63 | 85.07 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 47 | 1.4E-9 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 48 | 4.63E-11 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 64 | 3.5E-10 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 71 | 12.979973 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021743623.1 | serine/threonine-protein kinase PEPKR2-like [Chenopodium quinoa] | 0 |
| A8WIP6 | Cyclin-dependent kinase 20 OS=Danio rerio OX=7955 GN=cdk20 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LUV4 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg5811 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah019980, Ah024570, Ah030830 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.6AG0000470 |
| Arecaceae | Cocos nucifera | 1 | COCNU_07G013550 |
| Poaceae | Zea mays | 2 | Zm00001eb158010_P001, Zm00001eb266030_P001 |