Basic Information
Locus ID:
Ah019434
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Glutelin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_390_HRSCAF_510 | 12378831 | 12380694 | + | Ah019434 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.13 | 40,235.23 Da | 32.97 | 94.93 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02243 | cupin_11S_legumin_C | 213 | 360 | 1.99652E-69 | - |
| Pfam | PF00190 | Cupin | 82 | 171 | 2.3E-10 | IPR006045 |
| Pfam | PF00190 | Cupin | 214 | 343 | 5.1E-18 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 82 | 351 | 4.46E-36 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 208 | 363 | 4.0E-44 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 54 | 199 | 2.7E-20 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 3 | 172 | 2.6E-8 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 210 | 346 | 4.1E-15 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 226 | 246 | 1.2E-7 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 273 | 289 | 1.2E-7 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 291 | 306 | 1.2E-7 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_021774642.1 | 11S globulin seed storage protein 2-like [Chenopodium quinoa] | 0 |
| P07728 | Glutelin type-A 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GLUA1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803M5Y3 | 11-S seed storage protein, plant OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology