Basic Information
Locus ID:
Ah019346
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Short Name:
CPK24
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_390_HRSCAF_510 | 11346566 | 11349380 | + | Ah019346 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 55,273.15 Da | 40.03 | 77.82 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 64 | 269 | 1.07711E-94 | - |
| CDD | cd00051 | EFh | 389 | 454 | 6.54885E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 316 | 377 | 2.7E-8 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 388 | 453 | 1.1E-9 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 166 | 270 | 4.0E-26 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 67 | 157 | 4.5E-13 | IPR001245 |
| SUPERFAMILY | SSF47473 | EF-hand | 310 | 454 | 5.0E-38 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 53 | 298 | 2.25E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 288 | 453 | 4.5E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 67 | 154 | 1.2E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 157 | 278 | 1.7E-35 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 311 | 379 | 4.5E-47 | - |
| SMART | SM00054 | efh_1 | 353 | 381 | 3.7 | IPR002048 |
| SMART | SM00054 | efh_1 | 389 | 417 | 9.9E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 428 | 456 | 5.1E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 317 | 345 | 6.4E-5 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 65 | 270 | 22.195339 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 424 | 459 | 12.644413 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 313 | 348 | 14.876045 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 385 | 420 | 13.955498 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 71 | 94 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 362 | 374 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 437 | 449 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 398 | 410 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 326 | 338 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_021751845.1 | calcium-dependent protein kinase 24-like [Chenopodium quinoa] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KTC5 | Calcium-dependent protein kinase 24 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology