HalophFGD

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Basic Information
Locus ID: Ah018870
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description: B3 domain-containing protein
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_390_HRSCAF_510 6564092 6564698 - Ah018870
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.78 16,710.23 Da 39.08 94.72 -0.41
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 29 58 1.7E-4 IPR001810
SUPERFAMILY SSF81383 F-box domain 19 68 2.22E-10 IPR036047
SMART SM00256 fbox_2 21 62 0.0074 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G16810.1 F-box and associated interaction domains-containing protein. 0
RefSeq XP_021866160.1 F-box/kelch-repeat protein At3g06240-like [Spinacia oleracea] 0
Swiss-Prot Q84X43 F-box only protein 8 OS=Arabidopsis thaliana OX=3702 GN=FBX8 PE=2 SV=1 0
TrEMBL A0A0K9RC38 F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_087520 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 2 Ah018868, Ah018870
Amaranthaceae Chenopodium quinoa 1 CQ.Regalona.r1.3BG0003260
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.