HalophFGD

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Basic Information
Locus ID: Ah018868
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description: f-box protein
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_390_HRSCAF_510 6554735 6555982 - Ah018868
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.50 45,708.26 Da 39.87 93.68 -0.07
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 26 152 1.29E-8 IPR036047
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 128 347 3.8E-15 IPR017451
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G23880.1 F-box and associated interaction domains-containing protein. 0
RefSeq XP_021764911.1 uncharacterized protein LOC110729487 [Chenopodium quinoa] 0
Swiss-Prot Q9LIR8 F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana OX=3702 GN=At3g23880 PE=2 SV=1 0
TrEMBL G7ISR5 F-box protein interaction domain protein OS=Medicago truncatula OX=3880 GN=11416669 PE=4 SV=2 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 2 Ah018868, Ah018870
Amaranthaceae Chenopodium quinoa 1 CQ.Regalona.r1.3BG0003260
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.