HalophFGD

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Basic Information
Locus ID: Ah018816
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description: U-box domain-containing protein
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_390_HRSCAF_510 6084589 6096013 + Ah018816
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.23 203,692.86 Da 46.63 81.52 -0.41
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd01989 STK_N 979 1148 1.24338E-33 -
CDD cd16655 RING-Ubox_WDSUB1_like 889 929 8.02681E-20 -
CDD cd16655 RING-Ubox_WDSUB1_like 1787 1827 5.24982E-18 -
CDD cd01989 STK_N 12 170 2.71082E-41 -
Pfam PF04564 U-box domain 886 955 5.1E-16 IPR003613
Pfam PF00069 Protein kinase domain 602 837 3.1E-38 IPR000719
Pfam PF00069 Protein kinase domain 1500 1732 3.0E-38 IPR000719
Pfam PF04564 U-box domain 1784 1852 3.2E-15 IPR003613
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 1478 1756 1.62E-61 IPR011009
SUPERFAMILY SSF57850 RING/U-box 1774 1853 2.83E-22 -
SUPERFAMILY SSF57850 RING/U-box 875 954 6.98E-23 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 580 858 1.27E-63 IPR011009
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger) 886 959 8.9E-26 IPR013083
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 1570 1783 7.8E-46 -
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger) 1784 1855 1.6E-24 IPR013083
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 569 671 2.5E-20 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 1467 1569 9.0E-20 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 672 885 5.5E-46 -
SMART SM00504 Ubox_2 888 950 2.3E-26 IPR003613
SMART SM00220 serkin_6 1497 1762 4.0E-24 IPR000719
SMART SM00220 serkin_6 599 864 1.3E-26 IPR000719
SMART SM00504 Ubox_2 1786 1848 5.7E-22 IPR003613
ProSiteProfiles PS50011 Protein kinase domain profile. 599 864 33.813488 IPR000719
ProSiteProfiles PS51698 U-box domain profile. 1782 1855 26.901541 IPR003613
ProSiteProfiles PS51698 U-box domain profile. 884 957 28.794519 IPR003613
ProSiteProfiles PS50011 Protein kinase domain profile. 1497 1762 33.544941 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 1615 1627 - IPR008271
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 717 729 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 1503 1524 - IPR017441
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 605 626 - IPR017441
MobiDBLite mobidb-lite consensus disorder prediction 188 235 - -
MobiDBLite mobidb-lite consensus disorder prediction 1194 1222 - -
MobiDBLite mobidb-lite consensus disorder prediction 268 287 - -
MobiDBLite mobidb-lite consensus disorder prediction 1446 1464 - -
MobiDBLite mobidb-lite consensus disorder prediction 1358 1376 - -
MobiDBLite mobidb-lite consensus disorder prediction 1355 1376 - -
MobiDBLite mobidb-lite consensus disorder prediction 340 359 - -
MobiDBLite mobidb-lite consensus disorder prediction 1430 1464 - -
Coils Coil Coil 473 493 - -
Coils Coil Coil 1405 1433 - -
Coils Coil Coil 1762 1782 - -
Coils Coil Coil 864 884 - -
Coils Coil Coil 514 534 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation) GO:0016567 (protein ubiquitination)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0004842 (ubiquitin-protein transferase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G25160.1 U-box domain-containing protein kinase family protein. 0
RefSeq XP_021726830.1 U-box domain-containing protein 35-like [Chenopodium quinoa] 0
Swiss-Prot Q9SW11 U-box domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=PUB35 PE=2 SV=2 0
TrEMBL A0A803MKS8 Serine/threonine-protein kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 1 Ah018816
Amaranthaceae Salicornia europaea 1 Seu_jg15369
Amaranthaceae Suaeda glauca 3 Sgl01894, Sgl01917, Sgl07075
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.