halophFGD

Basic Information

Locus ID: Ah018628

Species & Taxonomic ID: Atriplex hortensis & 34272

Genome Assembly: Atriplex hortensis v2.0

Description: phenylalanine--tRNA ligase, chloroplastic

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Scaffold_390_HRSCAF_510	4377779	4378960	+	Ah018628

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.07	38,607.43 Da	37.36	92.54	-0.11

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
TIGRFAM	TIGR01640	F_box_assoc_1: F-box protein interaction domain	83	261	4.1E-23	IPR017451

KEGG Pathway

KO Term:

K01889 (phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20])

Pathway:

ko00970 (Aminoacyl-tRNA biosynthesis) map00970 (Aminoacyl-tRNA biosynthesis)

Reaction:

R03660 (ATP + L-Phenylalanine + tRNA(Phe) <=> AMP + Diphosphate + L-Phenylalanyl-tRNA(Phe))

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_021760735.1	F-box/kelch-repeat protein At3g23880-like, partial [Chenopodium quinoa]	0
TrEMBL	A0A803L2L2	FBA_1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	3	gene_16224, gene_16225, gene_3309
Amaranthaceae	Atriplex hortensis	4	Ah018628, Ah018636, Ah026408, Ah034286
Amaranthaceae	Beta vulgaris	4	BVRB_2g035230, BVRB_2g035240, BVRB_3g052040, BVRB_7g158190
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg13919, Sbi_jg15090, Sbi_jg15094, Sbi_jg52019 ... Sbi_jg55903, Sbi_jg55909
Amaranthaceae	Salicornia europaea	3	Seu_jg26400, Seu_jg26406, Seu_jg9833
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00020055, GOSA_00020064, GOSA_00022519
Amaranthaceae	Suaeda glauca	8	Sgl01329, Sgl01345, Sgl01359, Sgl06422, Sgl06435, Sgl06515 ... Sgl33203, Sgl38443
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000015046, gene:ENSEOMG00000031880 ... gene:ENSEOMG00000045259
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.3AG0004970, CQ.Regalona.r1.3BG0005000 ... CQ.Regalona.r1.6AG0017050, CQ.Regalona.r1.6BG0018160
Portulacaceae	Portulaca oleracea	4	evm.TU.LG01.1531, evm.TU.LG01.1541, evm.TU.LG14.787 ... evm.TU.LG14.791