Basic Information
Locus ID:
Ah018495
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
mediator of RNA polymerase II transcription subunit
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_390_HRSCAF_510 | 3312233 | 3322511 | - | Ah018495 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 80,413.56 Da | 35.13 | 90.53 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 423 | 496 | 7.72E-7 | IPR036047 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 356 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 324 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12230.1 | 0 | |
| RefSeq | XP_021733453.1 | mediator of RNA polymerase II transcription subunit 19a-like [Chenopodium quinoa] | 0 |
| Q9FMP0 | Mediator of RNA polymerase II transcription subunit 19a OS=Arabidopsis thaliana OX=3702 GN=MED19A PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L866 | Mediator of RNA polymerase II transcription subunit 19a OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.