Basic Information
Locus ID:
Ah018200
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_390_HRSCAF_510 | 654647 | 658536 | - | Ah018200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 113,907.29 Da | 33.17 | 101.03 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 88 | 2.1E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 285 | 345 | 4.2E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 728 | 997 | 2.0E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 728 | 1000 | 9.31E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 405 | 635 | 1.36E-45 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 97 | 442 | 1.02E-65 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 522 | 643 | 2.5E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 405 | 521 | 1.9E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 706 | 803 | 2.5E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 206 | 302 | 7.2E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 303 | 404 | 9.5E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 804 | 1018 | 5.2E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 205 | 8.6E-38 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 356 | 380 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 140 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 381 | 404 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 284 | 307 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 452 | 476 | 200.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 725 | 1004 | 3.2E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 571 | 594 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 308 | 332 | 8.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 260 | 283 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 212 | 236 | 57.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 310 | 333 | 7.411628 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 725 | 1012 | 38.44944 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 851 | 863 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 731 | 754 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021752360.1 | leucine-rich repeat receptor-like protein kinase TDR [Chenopodium quinoa] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KT63 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology